Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx2-1P50220 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.3□□□□□ -0.6
Nkx2-1P50220 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Gm18206-201ENSMUST00000207027 926 ntBASIC11.3□□□□□ -0.6
Nkx2-1P50220 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.3□□□□□ -0.6
Nkx2-1P50220 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.3□□□□□ -0.6
Nkx2-1P50220 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.3□□□□□ -0.6
Nkx2-1P50220 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.29□□□□□ -0.6
Nkx2-1P50220 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.29□□□□□ -0.6
Nkx2-1P50220 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.29□□□□□ -0.6
Nkx2-1P50220 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-1P50220 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.28□□□□□ -0.6
Nkx2-1P50220 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.28□□□□□ -0.6
Nkx2-1P50220 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.28□□□□□ -0.6
Nkx2-1P50220 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.28□□□□□ -0.6
Nkx2-1P50220 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.28□□□□□ -0.6
Nkx2-1P50220 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-1P50220 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms