Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Rfx3P48381 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rfx3P48381 Gm8396-201ENSMUST00000057361 823 ntBASIC12.35□□□□□ -0.43
Rfx3P48381 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.35□□□□□ -0.43
Rfx3P48381 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx3P48381 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rfx3P48381 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Rfx3P48381 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rfx3P48381 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rfx3P48381 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rfx3P48381 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.34□□□□□ -0.43
Rfx3P48381 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.34□□□□□ -0.43
Rfx3P48381 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.34□□□□□ -0.43
Rfx3P48381 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.34□□□□□ -0.43
Rfx3P48381 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.34□□□□□ -0.43
Rfx3P48381 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.34□□□□□ -0.43
Rfx3P48381 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.34□□□□□ -0.43
Rfx3P48381 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rfx3P48381 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rfx3P48381 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rfx3P48381 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Rfx3P48381 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfx3P48381 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.43
Rfx3P48381 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Rfx3P48381 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.33□□□□□ -0.43
Rfx3P48381 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Gm24543-201ENSMUST00000103867 82 ntBASIC12.33□□□□□ -0.44
Rfx3P48381 Gm6415-201ENSMUST00000118488 348 ntBASIC12.33□□□□□ -0.44
Rfx3P48381 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Rfx3P48381 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.33□□□□□ -0.44
Rfx3P48381 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.33□□□□□ -0.44
Rfx3P48381 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Dupd1-202ENSMUST00000224735 548 ntBASIC12.33□□□□□ -0.44
Rfx3P48381 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.33□□□□□ -0.44
Rfx3P48381 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rfx3P48381 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rfx3P48381 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Rfx3P48381 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rfx3P48381 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rfx3P48381 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfx3P48381 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms