Protein–RNA interactions for Protein: P47955

Rplp1, 60S acidic ribosomal protein P1, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rplp1P47955 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rplp1P47955 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Rplp1P47955 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rplp1P47955 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rplp1P47955 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rplp1P47955 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rplp1P47955 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rplp1P47955 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.36□□□□□ -0.59
Rplp1P47955 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.36□□□□□ -0.59
Rplp1P47955 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rplp1P47955 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Rplp1P47955 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.35□□□□□ -0.59
Rplp1P47955 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Mir1897-201ENSMUST00000122581 272 ntBASIC11.35□□□□□ -0.59
Rplp1P47955 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Gm42660-201ENSMUST00000197733 947 ntBASIC11.35□□□□□ -0.59
Rplp1P47955 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC11.35□□□□□ -0.59
Rplp1P47955 Gm45453-201ENSMUST00000211758 853 ntBASIC11.35□□□□□ -0.59
Rplp1P47955 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.35□□□□□ -0.59
Rplp1P47955 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.35□□□□□ -0.59
Rplp1P47955 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rplp1P47955 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Rplp1P47955 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rplp1P47955 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.35□□□□□ -0.59
Rplp1P47955 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.35□□□□□ -0.59
Rplp1P47955 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.35□□□□□ -0.59
Rplp1P47955 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rplp1P47955 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.35□□□□□ -0.59
Rplp1P47955 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rplp1P47955 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.35□□□□□ -0.59
Rplp1P47955 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rplp1P47955 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.34□□□□□ -0.59
Rplp1P47955 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Rplp1P47955 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.34□□□□□ -0.59
Rplp1P47955 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.34□□□□□ -0.59
Rplp1P47955 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.34□□□□□ -0.59
Rplp1P47955 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.34□□□□□ -0.59
Rplp1P47955 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 Gm44344-201ENSMUST00000200287 129 ntBASIC11.34□□□□□ -0.59
Rplp1P47955 Dupd1-202ENSMUST00000224735 548 ntBASIC11.34□□□□□ -0.59
Rplp1P47955 Shd-206ENSMUST00000225145 998 ntBASIC11.34□□□□□ -0.59
Rplp1P47955 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rplp1P47955 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Rplp1P47955 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rplp1P47955 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.34□□□□□ -0.59
Rplp1P47955 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Rplp1P47955 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.34□□□□□ -0.59
Rplp1P47955 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rplp1P47955 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rplp1P47955 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rplp1P47955 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rplp1P47955 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms