Protein–RNA interactions for Protein: P47242

Pax9, Paired box protein Pax-9, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax9P47242 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pax9P47242 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pax9P47242 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pax9P47242 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pax9P47242 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pax9P47242 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pax9P47242 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pax9P47242 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pax9P47242 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.64□□□□□ -0.55
Pax9P47242 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.63□□□□□ -0.55
Pax9P47242 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Syt7-205ENSMUST00000224135 1557 ntBASIC11.63□□□□□ -0.55
Pax9P47242 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.63□□□□□ -0.55
Pax9P47242 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Pax9P47242 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.63□□□□□ -0.55
Pax9P47242 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.63□□□□□ -0.55
Pax9P47242 Chchd1-203ENSMUST00000224633 557 ntBASIC11.63□□□□□ -0.55
Pax9P47242 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.63□□□□□ -0.55
Pax9P47242 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.63□□□□□ -0.55
Pax9P47242 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pax9P47242 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.63□□□□□ -0.55
Pax9P47242 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pax9P47242 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pax9P47242 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.62□□□□□ -0.55
Pax9P47242 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pax9P47242 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pax9P47242 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.62□□□□□ -0.55
Pax9P47242 Mir449b-201ENSMUST00000104833 80 ntBASIC11.62□□□□□ -0.55
Pax9P47242 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.62□□□□□ -0.55
Pax9P47242 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.62□□□□□ -0.55
Pax9P47242 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Pax9P47242 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.62□□□□□ -0.55
Pax9P47242 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.62□□□□□ -0.55
Pax9P47242 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.62□□□□□ -0.55
Pax9P47242 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.62□□□□□ -0.55
Pax9P47242 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Gm4804-201ENSMUST00000182234 999 ntBASIC11.62□□□□□ -0.55
Pax9P47242 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.62□□□□□ -0.55
Pax9P47242 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.62□□□□□ -0.55
Pax9P47242 Gm10766-202ENSMUST00000194123 606 ntBASIC11.62□□□□□ -0.55
Pax9P47242 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.62□□□□□ -0.55
Pax9P47242 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pax9P47242 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pax9P47242 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.62□□□□□ -0.55
Pax9P47242 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pax9P47242 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pax9P47242 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pax9P47242 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pax9P47242 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pax9P47242 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pax9P47242 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Pax9P47242 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pax9P47242 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pax9P47242 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pax9P47242 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pax9P47242 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pax9P47242 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pax9P47242 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pax9P47242 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pax9P47242 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms