Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TfamP40630 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.23□□□□□ -0.29
TfamP40630 Gm27702-201ENSMUST00000184512 56 ntBASIC13.23□□□□□ -0.29
TfamP40630 Gm21470-201ENSMUST00000187680 696 ntBASIC13.23□□□□□ -0.29
TfamP40630 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TfamP40630 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.23□□□□□ -0.29
TfamP40630 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.22□□□□□ -0.29
TfamP40630 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.22□□□□□ -0.29
TfamP40630 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TfamP40630 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.22□□□□□ -0.29
TfamP40630 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Gm6736-201ENSMUST00000166583 948 ntBASIC13.22□□□□□ -0.29
TfamP40630 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.22□□□□□ -0.29
TfamP40630 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.22□□□□□ -0.29
TfamP40630 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.22□□□□□ -0.29
TfamP40630 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.22□□□□□ -0.29
TfamP40630 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
TfamP40630 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TfamP40630 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TfamP40630 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TfamP40630 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.22□□□□□ -0.29
TfamP40630 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.22□□□□□ -0.29
TfamP40630 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TfamP40630 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.22□□□□□ -0.29
TfamP40630 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TfamP40630 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
TfamP40630 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TfamP40630 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TfamP40630 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.21□□□□□ -0.29
TfamP40630 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.21□□□□□ -0.29
TfamP40630 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TfamP40630 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TfamP40630 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TfamP40630 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TfamP40630 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
TfamP40630 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.21□□□□□ -0.29
TfamP40630 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TfamP40630 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TfamP40630 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.21□□□□□ -0.29
TfamP40630 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.21□□□□□ -0.29
TfamP40630 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.21□□□□□ -0.29
TfamP40630 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
TfamP40630 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TfamP40630 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TfamP40630 Gm46209-201ENSMUST00000217912 553 ntBASIC13.21□□□□□ -0.29
TfamP40630 Gm9229-201ENSMUST00000222777 126 ntBASIC13.21□□□□□ -0.29
TfamP40630 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.21□□□□□ -0.29
TfamP40630 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TfamP40630 Gm8396-201ENSMUST00000057361 823 ntBASIC13.21□□□□□ -0.29
TfamP40630 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TfamP40630 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.21□□□□□ -0.29
TfamP40630 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TfamP40630 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TfamP40630 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
TfamP40630 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TfamP40630 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TfamP40630 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TfamP40630 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TfamP40630 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TfamP40630 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms