Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Chd1P40201 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC20.02■□□□□ 0.79
Chd1P40201 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Chd1P40201 Rn7s6-201ENSMUST00000175005 291 ntBASIC20.02■□□□□ 0.79
Chd1P40201 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
Chd1P40201 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC20.02■□□□□ 0.79
Chd1P40201 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Chd1P40201 Gm10076-201ENSMUST00000073238 384 ntBASIC20.02■□□□□ 0.79
Chd1P40201 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Chd1P40201 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Chd1P40201 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Chd1P40201 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.01■□□□□ 0.79
Chd1P40201 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 Gm15889-202ENSMUST00000212669 2443 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Gm45242-201ENSMUST00000210666 2129 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 Mir680-2-201ENSMUST00000102163 110 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Gm23251-201ENSMUST00000103773 110 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Chd1P40201 Gm12816-201ENSMUST00000118069 1212 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Gm12291-201ENSMUST00000121627 311 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 Gm29615-201ENSMUST00000185371 697 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Gm28224-201ENSMUST00000186078 697 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Gm29001-201ENSMUST00000186177 697 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Gm28292-201ENSMUST00000186593 697 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Gm28101-201ENSMUST00000187608 697 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Gm29076-201ENSMUST00000187689 697 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Gm28302-201ENSMUST00000187931 697 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Gm28646-201ENSMUST00000188220 697 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Gm28205-201ENSMUST00000189177 697 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Gm29032-201ENSMUST00000189797 697 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Gm28695-201ENSMUST00000190300 697 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Gm37448-201ENSMUST00000192795 697 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Chd1P40201 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Chd1P40201 Gm4797-201ENSMUST00000219075 1283 ntBASIC20.01■□□□□ 0.79
Chd1P40201 AC174797.2-202ENSMUST00000225729 568 ntBASIC20.01■□□□□ 0.79
Chd1P40201 AC125209.1-201ENSMUST00000225812 766 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Gm5879-201ENSMUST00000089501 1209 ntBASIC20.01■□□□□ 0.79
Chd1P40201 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Chd1P40201 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd1P40201 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd1P40201 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd1P40201 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chd1P40201 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Chd1P40201 Gm14058-201ENSMUST00000116082 735 ntBASIC20■□□□□ 0.79
Chd1P40201 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC20■□□□□ 0.79
Chd1P40201 CT009713.8-201ENSMUST00000225448 560 ntBASIC20■□□□□ 0.79
Chd1P40201 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Chd1P40201 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd1P40201 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Chd1P40201 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC20■□□□□ 0.79
Chd1P40201 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chd1P40201 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Chd1P40201 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd1P40201 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd1P40201 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd1P40201 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd1P40201 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd1P40201 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Chd1P40201 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC20■□□□□ 0.79
Chd1P40201 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chd1P40201 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chd1P40201 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd1P40201 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC19.99■□□□□ 0.79
Chd1P40201 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC19.99■□□□□ 0.79
Chd1P40201 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd1P40201 Gm3671-201ENSMUST00000182463 1007 ntBASIC19.99■□□□□ 0.79
Chd1P40201 Gm45925-201ENSMUST00000218882 744 ntBASIC19.99■□□□□ 0.79
Chd1P40201 AC154176.1-201ENSMUST00000225897 220 ntBASIC19.99■□□□□ 0.79
Chd1P40201 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd1P40201 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd1P40201 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Chd1P40201 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd1P40201 Tmed9-203ENSMUST00000224741 1450 ntBASIC19.99■□□□□ 0.79
Chd1P40201 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd1P40201 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd1P40201 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Chd1P40201 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Chd1P40201 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Chd1P40201 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd1P40201 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd1P40201 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chd1P40201 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms