Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Foxa2P35583 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Foxa2P35583 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.48□□□□□ -0.57
Foxa2P35583 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Foxa2P35583 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.48□□□□□ -0.57
Foxa2P35583 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.48□□□□□ -0.57
Foxa2P35583 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.48□□□□□ -0.57
Foxa2P35583 Gm3436-201ENSMUST00000179930 840 ntBASIC11.48□□□□□ -0.57
Foxa2P35583 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Foxa2P35583 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.48□□□□□ -0.57
Foxa2P35583 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.48□□□□□ -0.57
Foxa2P35583 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.48□□□□□ -0.57
Foxa2P35583 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Foxa2P35583 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.48□□□□□ -0.57
Foxa2P35583 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Foxa2P35583 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Foxa2P35583 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Foxa2P35583 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.47□□□□□ -0.57
Foxa2P35583 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Foxa2P35583 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.47□□□□□ -0.57
Foxa2P35583 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Foxa2P35583 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Foxa2P35583 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.47□□□□□ -0.57
Foxa2P35583 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.47□□□□□ -0.57
Foxa2P35583 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.47□□□□□ -0.57
Foxa2P35583 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Gm14767-201ENSMUST00000121559 586 ntBASIC11.47□□□□□ -0.57
Foxa2P35583 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Foxa2P35583 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.47□□□□□ -0.57
Foxa2P35583 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Foxa2P35583 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Foxa2P35583 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.47□□□□□ -0.57
Foxa2P35583 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.47□□□□□ -0.57
Foxa2P35583 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Foxa2P35583 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Foxa2P35583 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.47□□□□□ -0.57
Foxa2P35583 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Foxa2P35583 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Foxa2P35583 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Foxa2P35583 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Foxa2P35583 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Foxa2P35583 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Foxa2P35583 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Foxa2P35583 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Foxa2P35583 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Foxa2P35583 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Foxa2P35583 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Foxa2P35583 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Foxa2P35583 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Foxa2P35583 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Foxa2P35583 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Foxa2P35583 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Foxa2P35583 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.46□□□□□ -0.57
Foxa2P35583 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Foxa2P35583 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Foxa2P35583 Gm6912-201ENSMUST00000117218 544 ntBASIC11.46□□□□□ -0.57
Foxa2P35583 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms