Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Slc6a11P31650 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.98□□□□□ -0.33
Slc6a11P31650 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Gm14719-201ENSMUST00000121891 340 ntBASIC12.98□□□□□ -0.33
Slc6a11P31650 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.98□□□□□ -0.33
Slc6a11P31650 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.98□□□□□ -0.33
Slc6a11P31650 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.98□□□□□ -0.33
Slc6a11P31650 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.98□□□□□ -0.33
Slc6a11P31650 Gm18041-201ENSMUST00000218210 618 ntBASIC12.98□□□□□ -0.33
Slc6a11P31650 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.98□□□□□ -0.33
Slc6a11P31650 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Slc6a11P31650 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Slc6a11P31650 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Slc6a11P31650 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Slc6a11P31650 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.98□□□□□ -0.33
Slc6a11P31650 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 BC001981-202ENSMUST00000191393 1545 ntBASIC12.98□□□□□ -0.33
Slc6a11P31650 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a11P31650 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Slc6a11P31650 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.97□□□□□ -0.33
Slc6a11P31650 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Slc6a11P31650 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Slc6a11P31650 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.97□□□□□ -0.33
Slc6a11P31650 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.97□□□□□ -0.33
Slc6a11P31650 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Slc6a11P31650 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.97□□□□□ -0.33
Slc6a11P31650 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.97□□□□□ -0.33
Slc6a11P31650 Gm27838-201ENSMUST00000184829 128 ntBASIC12.97□□□□□ -0.33
Slc6a11P31650 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.97□□□□□ -0.33
Slc6a11P31650 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.97□□□□□ -0.33
Slc6a11P31650 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.97□□□□□ -0.33
Slc6a11P31650 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Slc6a11P31650 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Slc6a11P31650 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.97□□□□□ -0.33
Slc6a11P31650 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.97□□□□□ -0.33
Slc6a11P31650 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Slc6a11P31650 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Slc6a11P31650 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a11P31650 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a11P31650 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.96□□□□□ -0.33
Slc6a11P31650 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a11P31650 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a11P31650 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Slc6a11P31650 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Slc6a11P31650 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a11P31650 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a11P31650 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a11P31650 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms