Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Col8a2P25318 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Gm14127-201ENSMUST00000117906 678 ntBASIC11.38□□□□□ -0.59
Col8a2P25318 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.38□□□□□ -0.59
Col8a2P25318 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.38□□□□□ -0.59
Col8a2P25318 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.38□□□□□ -0.59
Col8a2P25318 Gm5425-201ENSMUST00000214125 459 ntBASIC11.38□□□□□ -0.59
Col8a2P25318 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.38□□□□□ -0.59
Col8a2P25318 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.38□□□□□ -0.59
Col8a2P25318 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Col8a2P25318 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Col8a2P25318 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.38□□□□□ -0.59
Col8a2P25318 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.38□□□□□ -0.59
Col8a2P25318 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col8a2P25318 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Col8a2P25318 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.37□□□□□ -0.59
Col8a2P25318 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.37□□□□□ -0.59
Col8a2P25318 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.37□□□□□ -0.59
Col8a2P25318 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Col8a2P25318 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Col8a2P25318 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Col8a2P25318 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.37□□□□□ -0.59
Col8a2P25318 Gm11478-201ENSMUST00000117851 599 ntBASIC11.37□□□□□ -0.59
Col8a2P25318 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.37□□□□□ -0.59
Col8a2P25318 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.37□□□□□ -0.59
Col8a2P25318 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.37□□□□□ -0.59
Col8a2P25318 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.37□□□□□ -0.59
Col8a2P25318 Gm8463-201ENSMUST00000208573 613 ntBASIC11.37□□□□□ -0.59
Col8a2P25318 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.37□□□□□ -0.59
Col8a2P25318 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.37□□□□□ -0.59
Col8a2P25318 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.37□□□□□ -0.59
Col8a2P25318 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.37□□□□□ -0.59
Col8a2P25318 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Col8a2P25318 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.37□□□□□ -0.59
Col8a2P25318 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Col8a2P25318 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col8a2P25318 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.36□□□□□ -0.59
Col8a2P25318 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.36□□□□□ -0.59
Col8a2P25318 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.36□□□□□ -0.59
Col8a2P25318 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms