Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BdnfP21237 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BdnfP21237 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
BdnfP21237 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BdnfP21237 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BdnfP21237 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
BdnfP21237 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BdnfP21237 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BdnfP21237 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BdnfP21237 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
BdnfP21237 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
BdnfP21237 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
BdnfP21237 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
BdnfP21237 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BdnfP21237 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BdnfP21237 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BdnfP21237 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BdnfP21237 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
BdnfP21237 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
BdnfP21237 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
BdnfP21237 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.1□□□□□ -0.31
BdnfP21237 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
BdnfP21237 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.1□□□□□ -0.31
BdnfP21237 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
BdnfP21237 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
BdnfP21237 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
BdnfP21237 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.1□□□□□ -0.31
BdnfP21237 Gm24513-201ENSMUST00000174964 138 ntBASIC13.1□□□□□ -0.31
BdnfP21237 Gm9824-201ENSMUST00000178707 561 ntBASIC13.1□□□□□ -0.31
BdnfP21237 Gm18766-201ENSMUST00000189811 808 ntBASIC13.1□□□□□ -0.31
BdnfP21237 Gm29541-201ENSMUST00000191351 678 ntBASIC13.1□□□□□ -0.31
BdnfP21237 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
BdnfP21237 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
BdnfP21237 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
BdnfP21237 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.1□□□□□ -0.31
BdnfP21237 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.1□□□□□ -0.31
BdnfP21237 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.1□□□□□ -0.31
BdnfP21237 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
BdnfP21237 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
BdnfP21237 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
BdnfP21237 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
BdnfP21237 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
BdnfP21237 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
BdnfP21237 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.09□□□□□ -0.31
BdnfP21237 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.09□□□□□ -0.31
BdnfP21237 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
BdnfP21237 Gm27397-201ENSMUST00000184997 107 ntBASIC13.09□□□□□ -0.31
BdnfP21237 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Gm45453-201ENSMUST00000211758 853 ntBASIC13.09□□□□□ -0.31
BdnfP21237 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
BdnfP21237 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
BdnfP21237 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.09□□□□□ -0.31
BdnfP21237 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
BdnfP21237 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
BdnfP21237 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BdnfP21237 AC107453.4-201ENSMUST00000227068 1817 ntBASIC13.09□□□□□ -0.31
BdnfP21237 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms