Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.35□□□□□ -0.91
Smim1P0C8K7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Gm1995-201ENSMUST00000220838 2602 ntBASIC9.34□□□□□ -0.91
Smim1P0C8K7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Gm9013-201ENSMUST00000132939 882 ntBASIC9.34□□□□□ -0.91
Smim1P0C8K7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 AC132467.2-202ENSMUST00000227726 559 ntBASIC9.34□□□□□ -0.91
Smim1P0C8K7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smim1P0C8K7 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smim1P0C8K7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Smim1P0C8K7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC9.34□□□□□ -0.91
Smim1P0C8K7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Smim1P0C8K7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smim1P0C8K7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Smim1P0C8K7 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC9.34□□□□□ -0.92
Smim1P0C8K7 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.92
Smim1P0C8K7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC9.33□□□□□ -0.92
Smim1P0C8K7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Gm12882-201ENSMUST00000121696 517 ntBASIC9.33□□□□□ -0.92
Smim1P0C8K7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Gm27867-201ENSMUST00000184778 125 ntBASIC9.33□□□□□ -0.92
Smim1P0C8K7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 AC123645.1-201ENSMUST00000228469 605 ntBASIC9.33□□□□□ -0.92
Smim1P0C8K7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC9.33□□□□□ -0.92
Smim1P0C8K7 Gm5989-201ENSMUST00000096092 2077 ntBASIC9.33□□□□□ -0.92
Smim1P0C8K7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms