Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxb3P09026 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxb3P09026 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Hoxb3P09026 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.58□□□□□ -0.23
Hoxb3P09026 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.58□□□□□ -0.23
Hoxb3P09026 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hoxb3P09026 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hoxb3P09026 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Hoxb3P09026 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.58□□□□□ -0.23
Hoxb3P09026 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Hoxb3P09026 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Hoxb3P09026 Gm18719-201ENSMUST00000196696 1413 ntBASIC13.58□□□□□ -0.24
Hoxb3P09026 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxb3P09026 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxb3P09026 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxb3P09026 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxb3P09026 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.58□□□□□ -0.24
Hoxb3P09026 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxb3P09026 Gm13689-201ENSMUST00000119360 685 ntBASIC13.58□□□□□ -0.24
Hoxb3P09026 Gm14381-201ENSMUST00000122105 414 ntBASIC13.58□□□□□ -0.24
Hoxb3P09026 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxb3P09026 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Hoxb3P09026 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Hoxb3P09026 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.58□□□□□ -0.24
Hoxb3P09026 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.58□□□□□ -0.24
Hoxb3P09026 Gm29741-201ENSMUST00000192667 421 ntBASIC13.58□□□□□ -0.24
Hoxb3P09026 Gm7287-201ENSMUST00000205267 602 ntBASIC13.58□□□□□ -0.24
Hoxb3P09026 Gm45118-201ENSMUST00000208928 825 ntBASIC13.58□□□□□ -0.24
Hoxb3P09026 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.58□□□□□ -0.24
Hoxb3P09026 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Hoxb3P09026 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxb3P09026 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxb3P09026 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxb3P09026 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxb3P09026 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxb3P09026 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxb3P09026 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.58□□□□□ -0.24
Hoxb3P09026 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hoxb3P09026 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Hoxb3P09026 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.58□□□□□ -0.24
Hoxb3P09026 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
Hoxb3P09026 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Hoxb3P09026 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm12241-201ENSMUST00000118330 726 ntBASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm11340-201ENSMUST00000119226 412 ntBASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm11331-201ENSMUST00000119764 288 ntBASIC13.57□□□□□ -0.24
Hoxb3P09026 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm11675-201ENSMUST00000121873 832 ntBASIC13.57□□□□□ -0.24
Hoxb3P09026 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm42627-201ENSMUST00000197347 224 ntBASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm8463-201ENSMUST00000208573 613 ntBASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm18730-201ENSMUST00000218038 343 ntBASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm8768-201ENSMUST00000220020 826 ntBASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm35638-201ENSMUST00000220724 652 ntBASIC13.57□□□□□ -0.24
Hoxb3P09026 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Hoxb3P09026 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hoxb3P09026 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.56□□□□□ -0.24
Hoxb3P09026 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxb3P09026 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxb3P09026 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxb3P09026 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxb3P09026 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxb3P09026 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Hoxb3P09026 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxb3P09026 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.56□□□□□ -0.24
Hoxb3P09026 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxb3P09026 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxb3P09026 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxb3P09026 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxb3P09026 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hoxb3P09026 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Hoxb3P09026 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Hoxb3P09026 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.56□□□□□ -0.24
Hoxb3P09026 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 7 ms