Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.09□□□□□ -0.31
P04213 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04213 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P04213 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P04213 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.09□□□□□ -0.31
P04213 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04213 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04213 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04213 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04213 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04213 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P04213 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
P04213 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
P04213 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
P04213 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
P04213 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
P04213 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.08□□□□□ -0.32
P04213 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.08□□□□□ -0.32
P04213 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.08□□□□□ -0.32
P04213 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
P04213 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.08□□□□□ -0.32
P04213 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
P04213 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.08□□□□□ -0.32
P04213 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.08□□□□□ -0.32
P04213 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.08□□□□□ -0.32
P04213 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Gm24420-201ENSMUST00000176676 59 ntBASIC13.08□□□□□ -0.32
P04213 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
P04213 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
P04213 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
P04213 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
P04213 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P04213 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
P04213 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.07□□□□□ -0.32
P04213 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.07□□□□□ -0.32
P04213 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.07□□□□□ -0.32
P04213 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
P04213 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
P04213 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.07□□□□□ -0.32
P04213 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.07□□□□□ -0.32
P04213 Gm27306-201ENSMUST00000183970 107 ntBASIC13.07□□□□□ -0.32
P04213 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.07□□□□□ -0.32
P04213 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
P04213 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.07□□□□□ -0.32
P04213 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.07□□□□□ -0.32
P04213 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.07□□□□□ -0.32
P04213 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
P04213 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04213 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
P04213 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
P04213 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04213 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04213 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04213 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms