Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm12012-201ENSMUST00000118857 1066 ntBASIC16.44■□□□□ 0.22
Col4a1P02463 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Col4a1P02463 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Col4a1P02463 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Col4a1P02463 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a1P02463 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a1P02463 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a1P02463 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a1P02463 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Col4a1P02463 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a1P02463 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Col4a1P02463 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a1P02463 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a1P02463 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.44■□□□□ 0.22
Col4a1P02463 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a1P02463 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Col4a1P02463 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC16.43■□□□□ 0.22
Col4a1P02463 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a1P02463 Gm30285-201ENSMUST00000214614 422 ntBASIC16.43■□□□□ 0.22
Col4a1P02463 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Col4a1P02463 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a1P02463 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a1P02463 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a1P02463 Sybu-209ENSMUST00000228639 4113 ntBASIC16.43■□□□□ 0.22
Col4a1P02463 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a1P02463 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a1P02463 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC16.43■□□□□ 0.22
Col4a1P02463 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.43■□□□□ 0.22
Col4a1P02463 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a1P02463 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a1P02463 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a1P02463 Gm14381-201ENSMUST00000122105 414 ntBASIC16.43■□□□□ 0.22
Col4a1P02463 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Col4a1P02463 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a1P02463 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a1P02463 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a1P02463 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a1P02463 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a1P02463 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.42■□□□□ 0.22
Col4a1P02463 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a1P02463 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a1P02463 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a1P02463 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a1P02463 Gm8228-201ENSMUST00000189949 2192 ntBASIC16.42■□□□□ 0.22
Col4a1P02463 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a1P02463 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a1P02463 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.42■□□□□ 0.22
Col4a1P02463 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC16.42■□□□□ 0.22
Col4a1P02463 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC16.42■□□□□ 0.22
Col4a1P02463 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.42■□□□□ 0.22
Col4a1P02463 Gm17208-201ENSMUST00000168388 535 ntBASIC16.42■□□□□ 0.22
Col4a1P02463 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC16.42■□□□□ 0.22
Col4a1P02463 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a1P02463 Gm44772-201ENSMUST00000207623 1191 ntBASIC16.42■□□□□ 0.22
Col4a1P02463 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC16.42■□□□□ 0.22
Col4a1P02463 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC16.42■□□□□ 0.22
Col4a1P02463 AC155637.1-201ENSMUST00000218560 636 ntBASIC16.42■□□□□ 0.22
Col4a1P02463 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a1P02463 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col4a1P02463 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a1P02463 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a1P02463 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC16.42■□□□□ 0.22
Col4a1P02463 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a1P02463 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a1P02463 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col4a1P02463 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a1P02463 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a1P02463 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a1P02463 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a1P02463 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a1P02463 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a1P02463 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a1P02463 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Col4a1P02463 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC16.41■□□□□ 0.22
Col4a1P02463 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a1P02463 Gm20482-202ENSMUST00000174729 825 ntBASIC16.41■□□□□ 0.22
Col4a1P02463 Mettl6-204ENSMUST00000227595 1027 ntBASIC16.41■□□□□ 0.22
Col4a1P02463 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a1P02463 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a1P02463 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a1P02463 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a1P02463 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a1P02463 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a1P02463 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a1P02463 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.41■□□□□ 0.22
Col4a1P02463 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.41■□□□□ 0.22
Col4a1P02463 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.41■□□□□ 0.22
Col4a1P02463 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.41■□□□□ 0.22
Col4a1P02463 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC16.41■□□□□ 0.22
Col4a1P02463 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.41■□□□□ 0.22
Col4a1P02463 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a1P02463 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a1P02463 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a1P02463 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Col4a1P02463 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Col4a1P02463 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a1P02463 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms