Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
H3f3cP02301 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
H3f3cP02301 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.73□□□□□ -0.53
H3f3cP02301 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
H3f3cP02301 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.73□□□□□ -0.53
H3f3cP02301 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
H3f3cP02301 Gm9522-201ENSMUST00000182394 926 ntBASIC11.73□□□□□ -0.53
H3f3cP02301 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
H3f3cP02301 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
H3f3cP02301 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
H3f3cP02301 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.73□□□□□ -0.53
H3f3cP02301 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.73□□□□□ -0.53
H3f3cP02301 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Gm20445-201ENSMUST00000061905 565 ntBASIC11.73□□□□□ -0.53
H3f3cP02301 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.73□□□□□ -0.53
H3f3cP02301 Mir497b-201ENSMUST00000093601 125 ntBASIC11.73□□□□□ -0.53
H3f3cP02301 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
H3f3cP02301 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
H3f3cP02301 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
H3f3cP02301 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
H3f3cP02301 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.73□□□□□ -0.53
H3f3cP02301 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.72□□□□□ -0.53
H3f3cP02301 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.72□□□□□ -0.53
H3f3cP02301 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.72□□□□□ -0.53
H3f3cP02301 Mir698-201ENSMUST00000102164 109 ntBASIC11.72□□□□□ -0.53
H3f3cP02301 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Gm15240-201ENSMUST00000118156 720 ntBASIC11.72□□□□□ -0.53
H3f3cP02301 Gm13385-201ENSMUST00000121089 220 ntBASIC11.72□□□□□ -0.53
H3f3cP02301 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.72□□□□□ -0.53
H3f3cP02301 Gm25925-201ENSMUST00000158314 306 ntBASIC11.72□□□□□ -0.53
H3f3cP02301 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.72□□□□□ -0.53
H3f3cP02301 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.72□□□□□ -0.53
H3f3cP02301 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
H3f3cP02301 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
H3f3cP02301 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.72□□□□□ -0.53
H3f3cP02301 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
H3f3cP02301 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.72□□□□□ -0.53
H3f3cP02301 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.72□□□□□ -0.53
H3f3cP02301 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
H3f3cP02301 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3cP02301 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3cP02301 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3cP02301 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3cP02301 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3cP02301 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3cP02301 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3cP02301 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
H3f3cP02301 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3cP02301 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
H3f3cP02301 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.71□□□□□ -0.53
H3f3cP02301 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.71□□□□□ -0.53
H3f3cP02301 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
H3f3cP02301 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms