Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
P01852 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
P01852 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01852 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01852 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01852 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01852 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01852 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01852 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01852 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01852 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01852 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
P01852 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
P01852 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.49□□□□□ -0.41
P01852 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
P01852 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01852 Gm2445-201ENSMUST00000182798 989 ntBASIC12.49□□□□□ -0.41
P01852 Gm28631-201ENSMUST00000190740 334 ntBASIC12.49□□□□□ -0.41
P01852 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P01852 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P01852 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01852 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01852 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
P01852 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.49□□□□□ -0.41
P01852 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01852 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.49□□□□□ -0.41
P01852 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01852 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
P01852 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
P01852 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
P01852 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
P01852 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
P01852 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.48□□□□□ -0.41
P01852 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
P01852 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.48□□□□□ -0.41
P01852 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
P01852 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.48□□□□□ -0.41
P01852 Gm5354-201ENSMUST00000182417 973 ntBASIC12.48□□□□□ -0.41
P01852 Gm27772-201ENSMUST00000184900 187 ntBASIC12.48□□□□□ -0.41
P01852 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.48□□□□□ -0.41
P01852 Gm5279-201ENSMUST00000199575 745 ntBASIC12.48□□□□□ -0.41
P01852 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.48□□□□□ -0.41
P01852 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
P01852 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.48□□□□□ -0.41
P01852 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.48□□□□□ -0.41
P01852 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.48□□□□□ -0.41
P01852 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
P01852 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
P01852 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
P01852 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
P01852 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
P01852 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
P01852 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.47□□□□□ -0.41
P01852 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.47□□□□□ -0.41
P01852 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
P01852 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.47□□□□□ -0.41
P01852 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms