Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
DhfrP00375 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhfrP00375 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhfrP00375 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.35□□□□□ -0.43
DhfrP00375 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DhfrP00375 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
DhfrP00375 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.35□□□□□ -0.43
DhfrP00375 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.34□□□□□ -0.43
DhfrP00375 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.34□□□□□ -0.43
DhfrP00375 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.34□□□□□ -0.43
DhfrP00375 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
DhfrP00375 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.34□□□□□ -0.43
DhfrP00375 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.34□□□□□ -0.43
DhfrP00375 Mir6990-201ENSMUST00000183724 91 ntBASIC12.34□□□□□ -0.43
DhfrP00375 Gm20553-201ENSMUST00000204205 844 ntBASIC12.34□□□□□ -0.43
DhfrP00375 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.34□□□□□ -0.43
DhfrP00375 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.34□□□□□ -0.43
DhfrP00375 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.34□□□□□ -0.43
DhfrP00375 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
DhfrP00375 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.34□□□□□ -0.43
DhfrP00375 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
DhfrP00375 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
DhfrP00375 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.34□□□□□ -0.43
DhfrP00375 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
DhfrP00375 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.34□□□□□ -0.43
DhfrP00375 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
DhfrP00375 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DhfrP00375 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
DhfrP00375 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
DhfrP00375 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
DhfrP00375 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
DhfrP00375 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
DhfrP00375 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
DhfrP00375 Gm25287-201ENSMUST00000103846 110 ntBASIC12.33□□□□□ -0.44
DhfrP00375 Gm22918-201ENSMUST00000103855 110 ntBASIC12.33□□□□□ -0.44
DhfrP00375 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.33□□□□□ -0.44
DhfrP00375 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.33□□□□□ -0.44
DhfrP00375 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.33□□□□□ -0.44
DhfrP00375 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Gm43125-201ENSMUST00000201724 730 ntBASIC12.33□□□□□ -0.44
DhfrP00375 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Chchd1-203ENSMUST00000224633 557 ntBASIC12.33□□□□□ -0.44
DhfrP00375 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
DhfrP00375 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
DhfrP00375 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
DhfrP00375 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.33□□□□□ -0.44
DhfrP00375 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DhfrP00375 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DhfrP00375 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DhfrP00375 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
DhfrP00375 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DhfrP00375 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
DhfrP00375 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
DhfrP00375 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
DhfrP00375 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
DhfrP00375 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
DhfrP00375 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DhfrP00375 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.32□□□□□ -0.44
DhfrP00375 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
DhfrP00375 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.32□□□□□ -0.44
DhfrP00375 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms