Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.1□□□□□ -0.31
Hcn1O88704 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.1□□□□□ -0.31
Hcn1O88704 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hcn1O88704 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.1□□□□□ -0.31
Hcn1O88704 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hcn1O88704 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hcn1O88704 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.1□□□□□ -0.31
Hcn1O88704 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hcn1O88704 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hcn1O88704 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Hcn1O88704 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.1□□□□□ -0.31
Hcn1O88704 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hcn1O88704 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.09□□□□□ -0.31
Hcn1O88704 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Hcn1O88704 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.09□□□□□ -0.31
Hcn1O88704 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Hcn1O88704 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Gm15957-201ENSMUST00000118893 974 ntBASIC13.09□□□□□ -0.31
Hcn1O88704 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Hcn1O88704 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.09□□□□□ -0.31
Hcn1O88704 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Gm43703-201ENSMUST00000200523 763 ntBASIC13.09□□□□□ -0.31
Hcn1O88704 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Hcn1O88704 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.09□□□□□ -0.31
Hcn1O88704 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Gm9229-201ENSMUST00000222777 126 ntBASIC13.09□□□□□ -0.31
Hcn1O88704 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Hcn1O88704 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hcn1O88704 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.09□□□□□ -0.31
Hcn1O88704 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.09□□□□□ -0.31
Hcn1O88704 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Hcn1O88704 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hcn1O88704 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hcn1O88704 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Hcn1O88704 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Hcn1O88704 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Hcn1O88704 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.08□□□□□ -0.32
Hcn1O88704 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Hcn1O88704 Gm3436-201ENSMUST00000179930 840 ntBASIC13.08□□□□□ -0.32
Hcn1O88704 Gm6916-202ENSMUST00000205523 195 ntBASIC13.08□□□□□ -0.32
Hcn1O88704 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.08□□□□□ -0.32
Hcn1O88704 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.08□□□□□ -0.32
Hcn1O88704 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.08□□□□□ -0.32
Hcn1O88704 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hcn1O88704 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcn1O88704 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcn1O88704 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcn1O88704 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcn1O88704 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Hcn1O88704 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcn1O88704 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hcn1O88704 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.07□□□□□ -0.32
Hcn1O88704 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.07□□□□□ -0.32
Hcn1O88704 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.07□□□□□ -0.32
Hcn1O88704 Gm15487-201ENSMUST00000122373 465 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms