Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BckdkO55028 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
BckdkO55028 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.68□□□□□ -0.38
BckdkO55028 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
BckdkO55028 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
BckdkO55028 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.68□□□□□ -0.38
BckdkO55028 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.68□□□□□ -0.38
BckdkO55028 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BckdkO55028 Gm12882-201ENSMUST00000121696 517 ntBASIC12.68□□□□□ -0.38
BckdkO55028 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
BckdkO55028 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BckdkO55028 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.68□□□□□ -0.38
BckdkO55028 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.68□□□□□ -0.38
BckdkO55028 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
BckdkO55028 Gm9794-201ENSMUST00000202370 423 ntBASIC12.68□□□□□ -0.38
BckdkO55028 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
BckdkO55028 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
BckdkO55028 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
BckdkO55028 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.68□□□□□ -0.38
BckdkO55028 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BckdkO55028 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
BckdkO55028 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.68□□□□□ -0.38
BckdkO55028 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BckdkO55028 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BckdkO55028 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BckdkO55028 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BckdkO55028 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
BckdkO55028 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BckdkO55028 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BckdkO55028 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
BckdkO55028 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
BckdkO55028 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BckdkO55028 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
BckdkO55028 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BckdkO55028 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
BckdkO55028 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BckdkO55028 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
BckdkO55028 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
BckdkO55028 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BckdkO55028 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BckdkO55028 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
BckdkO55028 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BckdkO55028 Gm22189-201ENSMUST00000103822 86 ntBASIC12.67□□□□□ -0.38
BckdkO55028 Gm15460-201ENSMUST00000118147 391 ntBASIC12.67□□□□□ -0.38
BckdkO55028 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.67□□□□□ -0.38
BckdkO55028 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
BckdkO55028 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BckdkO55028 Gm8515-201ENSMUST00000194852 576 ntBASIC12.67□□□□□ -0.38
BckdkO55028 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
BckdkO55028 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
BckdkO55028 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BckdkO55028 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BckdkO55028 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
BckdkO55028 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
BckdkO55028 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
BckdkO55028 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
BckdkO55028 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BckdkO55028 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BckdkO55028 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
BckdkO55028 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
BckdkO55028 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
BckdkO55028 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.66□□□□□ -0.38
BckdkO55028 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.66□□□□□ -0.38
BckdkO55028 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
BckdkO55028 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
BckdkO55028 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
BckdkO55028 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Gm28760-201ENSMUST00000185995 736 ntBASIC12.66□□□□□ -0.38
BckdkO55028 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.66□□□□□ -0.38
BckdkO55028 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
BckdkO55028 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.66□□□□□ -0.38
BckdkO55028 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.66□□□□□ -0.38
BckdkO55028 Gm9797-201ENSMUST00000052902 613 ntBASIC12.66□□□□□ -0.38
BckdkO55028 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.66□□□□□ -0.38
BckdkO55028 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
BckdkO55028 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
BckdkO55028 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
BckdkO55028 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
BckdkO55028 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
BckdkO55028 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BckdkO55028 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms