Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.13□□□□□ -0.15
Cldn5O54942 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.13□□□□□ -0.15
Cldn5O54942 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cldn5O54942 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.13□□□□□ -0.15
Cldn5O54942 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.13□□□□□ -0.15
Cldn5O54942 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cldn5O54942 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cldn5O54942 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn5O54942 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Cldn5O54942 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
Cldn5O54942 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Cldn5O54942 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Cldn5O54942 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.12□□□□□ -0.15
Cldn5O54942 Gm8652-201ENSMUST00000181363 964 ntBASIC14.12□□□□□ -0.15
Cldn5O54942 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.12□□□□□ -0.15
Cldn5O54942 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.12□□□□□ -0.15
Cldn5O54942 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.12□□□□□ -0.15
Cldn5O54942 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.12□□□□□ -0.15
Cldn5O54942 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn5O54942 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.11□□□□□ -0.15
Cldn5O54942 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.11□□□□□ -0.15
Cldn5O54942 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.11□□□□□ -0.15
Cldn5O54942 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cldn5O54942 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cldn5O54942 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cldn5O54942 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.11□□□□□ -0.15
Cldn5O54942 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.11□□□□□ -0.15
Cldn5O54942 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.11□□□□□ -0.15
Cldn5O54942 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.11□□□□□ -0.15
Cldn5O54942 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.11□□□□□ -0.15
Cldn5O54942 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Gm25857-201ENSMUST00000082788 129 ntBASIC14.11□□□□□ -0.15
Cldn5O54942 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn5O54942 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms