Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.22■□□□□ 0.19
Smarce1O54941 Gm28630-201ENSMUST00000187806 498 ntBASIC16.22■□□□□ 0.19
Smarce1O54941 Gm5425-201ENSMUST00000214125 459 ntBASIC16.22■□□□□ 0.19
Smarce1O54941 Gm9229-201ENSMUST00000222777 126 ntBASIC16.22■□□□□ 0.19
Smarce1O54941 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smarce1O54941 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC16.22■□□□□ 0.19
Smarce1O54941 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarce1O54941 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Smarce1O54941 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.21■□□□□ 0.19
Smarce1O54941 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarce1O54941 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarce1O54941 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarce1O54941 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smarce1O54941 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarce1O54941 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smarce1O54941 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarce1O54941 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smarce1O54941 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.21■□□□□ 0.19
Smarce1O54941 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarce1O54941 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarce1O54941 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.21■□□□□ 0.19
Smarce1O54941 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Smarce1O54941 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smarce1O54941 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Smarce1O54941 Gm8410-201ENSMUST00000117225 605 ntBASIC16.21■□□□□ 0.19
Smarce1O54941 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.21■□□□□ 0.19
Smarce1O54941 Mir1897-201ENSMUST00000122581 272 ntBASIC16.21■□□□□ 0.19
Smarce1O54941 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.21■□□□□ 0.19
Smarce1O54941 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.21■□□□□ 0.19
Smarce1O54941 Gm8927-201ENSMUST00000181978 981 ntBASIC16.21■□□□□ 0.19
Smarce1O54941 Gm7774-201ENSMUST00000200064 533 ntBASIC16.21■□□□□ 0.19
Smarce1O54941 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarce1O54941 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.21■□□□□ 0.19
Smarce1O54941 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarce1O54941 Gm3222-201ENSMUST00000071282 990 ntBASIC16.21■□□□□ 0.19
Smarce1O54941 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Smarce1O54941 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Smarce1O54941 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarce1O54941 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarce1O54941 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarce1O54941 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarce1O54941 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smarce1O54941 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smarce1O54941 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smarce1O54941 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smarce1O54941 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smarce1O54941 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Smarce1O54941 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.2■□□□□ 0.18
Smarce1O54941 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Smarce1O54941 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.2■□□□□ 0.18
Smarce1O54941 Gm6415-201ENSMUST00000118488 348 ntBASIC16.2■□□□□ 0.18
Smarce1O54941 Gm15693-201ENSMUST00000120470 637 ntBASIC16.2■□□□□ 0.18
Smarce1O54941 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.2■□□□□ 0.18
Smarce1O54941 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Smarce1O54941 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Smarce1O54941 Gm43514-201ENSMUST00000198852 424 ntBASIC16.2■□□□□ 0.18
Smarce1O54941 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.2■□□□□ 0.18
Smarce1O54941 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.2■□□□□ 0.18
Smarce1O54941 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smarce1O54941 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarce1O54941 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Smarce1O54941 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms