Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Sdc4O35988 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sdc4O35988 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.04□□□□□ -0.16
Sdc4O35988 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Sdc4O35988 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.04□□□□□ -0.16
Sdc4O35988 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.04□□□□□ -0.16
Sdc4O35988 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.04□□□□□ -0.16
Sdc4O35988 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sdc4O35988 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sdc4O35988 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Sdc4O35988 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sdc4O35988 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sdc4O35988 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.04□□□□□ -0.16
Sdc4O35988 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sdc4O35988 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.04□□□□□ -0.16
Sdc4O35988 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Sdc4O35988 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.04□□□□□ -0.16
Sdc4O35988 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sdc4O35988 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sdc4O35988 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.03□□□□□ -0.16
Sdc4O35988 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.03□□□□□ -0.16
Sdc4O35988 Gm11814-201ENSMUST00000119515 929 ntBASIC14.03□□□□□ -0.16
Sdc4O35988 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.03□□□□□ -0.16
Sdc4O35988 Gm38671-201ENSMUST00000200573 130 ntBASIC14.03□□□□□ -0.16
Sdc4O35988 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.03□□□□□ -0.16
Sdc4O35988 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.03□□□□□ -0.16
Sdc4O35988 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sdc4O35988 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sdc4O35988 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sdc4O35988 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sdc4O35988 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sdc4O35988 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sdc4O35988 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.02□□□□□ -0.16
Sdc4O35988 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sdc4O35988 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Sdc4O35988 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Sdc4O35988 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sdc4O35988 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sdc4O35988 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sdc4O35988 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.02□□□□□ -0.16
Sdc4O35988 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.02□□□□□ -0.17
Sdc4O35988 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.02□□□□□ -0.17
Sdc4O35988 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.02□□□□□ -0.17
Sdc4O35988 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.02□□□□□ -0.17
Sdc4O35988 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 Gm38144-201ENSMUST00000192790 465 ntBASIC14.02□□□□□ -0.17
Sdc4O35988 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.02□□□□□ -0.17
Sdc4O35988 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.02□□□□□ -0.17
Sdc4O35988 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Sdc4O35988 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sdc4O35988 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms