Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prrt1O35449 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prrt1O35449 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prrt1O35449 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prrt1O35449 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prrt1O35449 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prrt1O35449 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prrt1O35449 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prrt1O35449 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prrt1O35449 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Prrt1O35449 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prrt1O35449 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Prrt1O35449 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Prrt1O35449 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Prrt1O35449 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
Prrt1O35449 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.52□□□□□ -0.56
Prrt1O35449 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Prrt1O35449 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.52□□□□□ -0.56
Prrt1O35449 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Prrt1O35449 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Prrt1O35449 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Prrt1O35449 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Prrt1O35449 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Prrt1O35449 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Prrt1O35449 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.52□□□□□ -0.56
Prrt1O35449 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.52□□□□□ -0.57
Prrt1O35449 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prrt1O35449 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prrt1O35449 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prrt1O35449 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Prrt1O35449 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.52□□□□□ -0.57
Prrt1O35449 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.52□□□□□ -0.57
Prrt1O35449 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.52□□□□□ -0.57
Prrt1O35449 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.52□□□□□ -0.57
Prrt1O35449 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.52□□□□□ -0.57
Prrt1O35449 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.52□□□□□ -0.57
Prrt1O35449 Gm25927-201ENSMUST00000175058 117 ntBASIC11.52□□□□□ -0.57
Prrt1O35449 Gm27920-201ENSMUST00000183953 96 ntBASIC11.52□□□□□ -0.57
Prrt1O35449 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Prrt1O35449 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Prrt1O35449 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.52□□□□□ -0.57
Prrt1O35449 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Prrt1O35449 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prrt1O35449 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prrt1O35449 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prrt1O35449 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prrt1O35449 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Prrt1O35449 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Prrt1O35449 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prrt1O35449 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.52□□□□□ -0.57
Prrt1O35449 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.52□□□□□ -0.57
Prrt1O35449 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prrt1O35449 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.52□□□□□ -0.57
Prrt1O35449 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prrt1O35449 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prrt1O35449 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Prrt1O35449 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
Prrt1O35449 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prrt1O35449 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prrt1O35449 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Prrt1O35449 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Prrt1O35449 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.51□□□□□ -0.57
Prrt1O35449 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.51□□□□□ -0.57
Prrt1O35449 Gm7153-201ENSMUST00000117092 455 ntBASIC11.51□□□□□ -0.57
Prrt1O35449 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.51□□□□□ -0.57
Prrt1O35449 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.51□□□□□ -0.57
Prrt1O35449 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Gm15483-201ENSMUST00000120338 456 ntBASIC11.51□□□□□ -0.57
Prrt1O35449 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Gm27301-201ENSMUST00000184012 127 ntBASIC11.51□□□□□ -0.57
Prrt1O35449 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.51□□□□□ -0.57
Prrt1O35449 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.51□□□□□ -0.57
Prrt1O35449 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.51□□□□□ -0.57
Prrt1O35449 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prrt1O35449 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms