Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf2O35218 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf2O35218 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cpsf2O35218 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf2O35218 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.63□□□□□ -0.07
Cpsf2O35218 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf2O35218 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf2O35218 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cpsf2O35218 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.62□□□□□ -0.07
Cpsf2O35218 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Cpsf2O35218 Mir1897-201ENSMUST00000122581 272 ntBASIC14.62□□□□□ -0.07
Cpsf2O35218 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.62□□□□□ -0.07
Cpsf2O35218 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.62□□□□□ -0.07
Cpsf2O35218 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cpsf2O35218 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Cpsf2O35218 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.62□□□□□ -0.07
Cpsf2O35218 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.62□□□□□ -0.07
Cpsf2O35218 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cpsf2O35218 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf2O35218 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf2O35218 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf2O35218 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf2O35218 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.61□□□□□ -0.07
Cpsf2O35218 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf2O35218 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cpsf2O35218 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf2O35218 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cpsf2O35218 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf2O35218 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf2O35218 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf2O35218 Gm24543-201ENSMUST00000103867 82 ntBASIC14.61□□□□□ -0.07
Cpsf2O35218 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf2O35218 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Cpsf2O35218 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.61□□□□□ -0.07
Cpsf2O35218 Chchd1-203ENSMUST00000224633 557 ntBASIC14.61□□□□□ -0.07
Cpsf2O35218 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.61□□□□□ -0.07
Cpsf2O35218 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf2O35218 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf2O35218 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf2O35218 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf2O35218 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf2O35218 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cpsf2O35218 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf2O35218 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf2O35218 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cpsf2O35218 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.6□□□□□ -0.07
Cpsf2O35218 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cpsf2O35218 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.6□□□□□ -0.07
Cpsf2O35218 Gm6415-201ENSMUST00000118488 348 ntBASIC14.6□□□□□ -0.07
Cpsf2O35218 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Cpsf2O35218 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.6□□□□□ -0.07
Cpsf2O35218 Gm7774-201ENSMUST00000200064 533 ntBASIC14.6□□□□□ -0.07
Cpsf2O35218 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.6□□□□□ -0.07
Cpsf2O35218 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.6□□□□□ -0.07
Cpsf2O35218 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.6□□□□□ -0.07
Cpsf2O35218 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.6□□□□□ -0.07
Cpsf2O35218 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf2O35218 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms