Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Gm12895-201ENSMUST00000122214 226 ntBASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Gm28659-201ENSMUST00000188013 759 ntBASIC13.99□□□□□ -0.17
Trim55G3X8Y1 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.99□□□□□ -0.17
Trim55G3X8Y1 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Rprl3-201ENSMUST00000157400 290 ntBASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Gm27459-201ENSMUST00000184860 107 ntBASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trim55G3X8Y1 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Gm12497-201ENSMUST00000138778 237 ntBASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim55G3X8Y1 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim55G3X8Y1 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms