Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TprF6ZDS4 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TprF6ZDS4 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TprF6ZDS4 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TprF6ZDS4 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TprF6ZDS4 Gm15371-201ENSMUST00000117057 784 ntBASIC12.54□□□□□ -0.4
TprF6ZDS4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.54□□□□□ -0.4
TprF6ZDS4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TprF6ZDS4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.54□□□□□ -0.4
TprF6ZDS4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TprF6ZDS4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.54□□□□□ -0.4
TprF6ZDS4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TprF6ZDS4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TprF6ZDS4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TprF6ZDS4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TprF6ZDS4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TprF6ZDS4 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TprF6ZDS4 Gm10156-201ENSMUST00000122364 462 ntBASIC12.54□□□□□ -0.4
TprF6ZDS4 Gm17376-201ENSMUST00000166016 84 ntBASIC12.54□□□□□ -0.4
TprF6ZDS4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TprF6ZDS4 Gm26927-201ENSMUST00000182385 965 ntBASIC12.54□□□□□ -0.4
TprF6ZDS4 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.54□□□□□ -0.4
TprF6ZDS4 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.54□□□□□ -0.4
TprF6ZDS4 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.54□□□□□ -0.4
TprF6ZDS4 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.54□□□□□ -0.4
TprF6ZDS4 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.54□□□□□ -0.4
TprF6ZDS4 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.54□□□□□ -0.4
TprF6ZDS4 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.54□□□□□ -0.4
TprF6ZDS4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TprF6ZDS4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TprF6ZDS4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TprF6ZDS4 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.54□□□□□ -0.4
TprF6ZDS4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TprF6ZDS4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TprF6ZDS4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TprF6ZDS4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.54□□□□□ -0.4
TprF6ZDS4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.54□□□□□ -0.4
TprF6ZDS4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.54□□□□□ -0.4
TprF6ZDS4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TprF6ZDS4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.54□□□□□ -0.4
TprF6ZDS4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TprF6ZDS4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Gm11793-201ENSMUST00000120433 981 ntBASIC12.53□□□□□ -0.4
TprF6ZDS4 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.53□□□□□ -0.4
TprF6ZDS4 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
TprF6ZDS4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.53□□□□□ -0.4
TprF6ZDS4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.53□□□□□ -0.4
TprF6ZDS4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TprF6ZDS4 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.53□□□□□ -0.4
TprF6ZDS4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
TprF6ZDS4 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
TprF6ZDS4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Gm27438-201ENSMUST00000183480 110 ntBASIC12.53□□□□□ -0.4
TprF6ZDS4 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.53□□□□□ -0.4
TprF6ZDS4 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.53□□□□□ -0.4
TprF6ZDS4 Gm18935-201ENSMUST00000212692 664 ntBASIC12.53□□□□□ -0.4
TprF6ZDS4 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.53□□□□□ -0.4
TprF6ZDS4 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TprF6ZDS4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TprF6ZDS4 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.52□□□□□ -0.4
TprF6ZDS4 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.52□□□□□ -0.4
TprF6ZDS4 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.52□□□□□ -0.4
TprF6ZDS4 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
TprF6ZDS4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TprF6ZDS4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TprF6ZDS4 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TprF6ZDS4 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TprF6ZDS4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TprF6ZDS4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TprF6ZDS4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TprF6ZDS4 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TprF6ZDS4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms