Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Gm25880-201ENSMUST00000104331 132 ntBASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Gm10051-201ENSMUST00000145209 414 ntBASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Gm18734-201ENSMUST00000172937 808 ntBASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Gm19287-201ENSMUST00000203190 358 ntBASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Gm45433-201ENSMUST00000209386 247 ntBASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc188F6WEU2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ccdc188F6WEU2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Gm19353-201ENSMUST00000184561 445 ntBASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Gm8712-201ENSMUST00000221090 701 ntBASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc188F6WEU2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms