Protein–RNA interactions for Protein: F6U473

Gm28305, Predicted gene 28305 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28305F6U473 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm28305F6U473 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm28305F6U473 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm28305F6U473 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Gm28305F6U473 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm28305F6U473 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm28305F6U473 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Gm28305F6U473 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm28305F6U473 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm28305F6U473 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Gm28305F6U473 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm28305F6U473 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Gm28305F6U473 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Gm28305F6U473 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm28305F6U473 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Gm28305F6U473 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Gm28305F6U473 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Gm28305F6U473 AC154725.1-201ENSMUST00000224826 1961 ntBASIC9.95□□□□□ -0.82
Gm28305F6U473 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Gm28305F6U473 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Gm28305F6U473 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Gm28305F6U473 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Gm28305F6U473 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Gm28305F6U473 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Gm13722-201ENSMUST00000117964 3066 ntBASIC9.95□□□□□ -0.82
Gm28305F6U473 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Gm28305F6U473 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC9.95□□□□□ -0.82
Gm28305F6U473 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Gm28305F6U473 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC9.95□□□□□ -0.82
Gm28305F6U473 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC9.95□□□□□ -0.82
Gm28305F6U473 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC9.95□□□□□ -0.82
Gm28305F6U473 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC9.95□□□□□ -0.82
Gm28305F6U473 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Gm28305F6U473 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC9.95□□□□□ -0.82
Gm28305F6U473 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC9.95□□□□□ -0.82
Gm28305F6U473 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC9.95□□□□□ -0.82
Gm28305F6U473 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Gm28305F6U473 Gm38385-201ENSMUST00000194454 2351 ntBASIC9.95□□□□□ -0.82
Gm28305F6U473 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Gm28305F6U473 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Gm28305F6U473 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC9.94□□□□□ -0.82
Gm28305F6U473 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Gm28305F6U473 AC126549.2-201ENSMUST00000223997 1976 ntBASIC9.94□□□□□ -0.82
Gm28305F6U473 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC9.94□□□□□ -0.82
Gm28305F6U473 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Gm28305F6U473 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC9.94□□□□□ -0.82
Gm28305F6U473 Gm13312-201ENSMUST00000119631 718 ntBASIC9.94□□□□□ -0.82
Gm28305F6U473 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC9.94□□□□□ -0.82
Gm28305F6U473 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC9.94□□□□□ -0.82
Gm28305F6U473 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC9.94□□□□□ -0.82
Gm28305F6U473 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Gm28305F6U473 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC9.94□□□□□ -0.82
Gm28305F6U473 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Gm28305F6U473 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm28305F6U473 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Gm28305F6U473 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Gm28305F6U473 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms