Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Gm6244-201ENSMUST00000178732 841 ntBASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Gm7287-201ENSMUST00000205267 602 ntBASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Gm5035-201ENSMUST00000215581 927 ntBASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Tmf1B9EKI3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Gm17150-201ENSMUST00000165577 381 ntBASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 AC110817.1-201ENSMUST00000225706 605 ntBASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Gm5356-201ENSMUST00000093326 615 ntBASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Gm10729-202ENSMUST00000193403 1375 ntBASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tmf1B9EKI3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Gm27892-201ENSMUST00000185017 106 ntBASIC18.4■□□□□ 0.54
Tmf1B9EKI3 AY702102-202ENSMUST00000194651 1173 ntBASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Rn7sk-201ENSMUST00000083103 331 ntBASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Gm26315-201ENSMUST00000083890 321 ntBASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmf1B9EKI3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tmf1B9EKI3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tmf1B9EKI3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tmf1B9EKI3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tmf1B9EKI3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Tmf1B9EKI3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Tmf1B9EKI3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tmf1B9EKI3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Il17rd-203ENSMUST00000225146 3366 ntBASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Gm9755-201ENSMUST00000032981 1356 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms