Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Gm24543-201ENSMUST00000103867 82 ntBASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Trav12-1A0N8R1 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.4□□□□□ -0.59
Trav12-1A0N8R1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav12-1A0N8R1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trav12-1A0N8R1 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Gm15460-201ENSMUST00000118147 391 ntBASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Gm15653-201ENSMUST00000119247 907 ntBASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Gm21470-201ENSMUST00000187680 696 ntBASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Gm8000-201ENSMUST00000188378 592 ntBASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav12-1A0N8R1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 Gm24158-201ENSMUST00000175263 71 ntBASIC11.38□□□□□ -0.59
Trav12-1A0N8R1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms