Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cfap99A0A140LIX9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Gm27486-201ENSMUST00000184923 80 ntBASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Gm18905-201ENSMUST00000205454 928 ntBASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cfap99A0A140LIX9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Gm12957-201ENSMUST00000117835 377 ntBASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cfap99A0A140LIX9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.29■□□□□ 0.2
Cfap99A0A140LIX9 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms