Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm12260-201ENSMUST00000122447 411 ntBASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm25927-201ENSMUST00000175058 117 ntBASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm2445-201ENSMUST00000182798 989 ntBASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Mzt1-203ENSMUST00000227948 952 ntBASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Gpr146-202ENSMUST00000053120 1040 ntBASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav13-4-dv7A0A075B6C2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC9.4□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 AA543401-201ENSMUST00000164248 1269 ntBASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Gm5712-201ENSMUST00000199748 1043 ntBASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Gm20553-201ENSMUST00000204205 844 ntBASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Gm44608-201ENSMUST00000206827 855 ntBASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 AC166341.4-201ENSMUST00000220625 123 ntBASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav13-4-dv7A0A075B6C2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms