Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav6n-6A0A075B6B2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm25911-201ENSMUST00000157621 56 ntBASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm5628-201ENSMUST00000222318 1049 ntBASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 CT030684.1-201ENSMUST00000227292 914 ntBASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav6n-6A0A075B6B2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms