Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm43514-201ENSMUST00000198852 424 ntBASIC11.2□□□□□ -0.62
Trav18A0A075B656 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav18A0A075B656 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.2□□□□□ -0.62
Trav18A0A075B656 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav18A0A075B656 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Gm8410-201ENSMUST00000117225 605 ntBASIC11.19□□□□□ -0.62
Trav18A0A075B656 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Gm24513-201ENSMUST00000174964 138 ntBASIC11.19□□□□□ -0.62
Trav18A0A075B656 Gm27397-201ENSMUST00000184997 107 ntBASIC11.19□□□□□ -0.62
Trav18A0A075B656 Gm10253-201ENSMUST00000194270 940 ntBASIC11.19□□□□□ -0.62
Trav18A0A075B656 Gm7774-201ENSMUST00000200064 533 ntBASIC11.19□□□□□ -0.62
Trav18A0A075B656 Gm44719-201ENSMUST00000206404 149 ntBASIC11.19□□□□□ -0.62
Trav18A0A075B656 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav18A0A075B656 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.18□□□□□ -0.62
Trav18A0A075B656 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Trav18A0A075B656 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.18□□□□□ -0.62
Trav18A0A075B656 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.18□□□□□ -0.62
Trav18A0A075B656 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Mir698-201ENSMUST00000102164 109 ntBASIC11.18□□□□□ -0.62
Trav18A0A075B656 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Gm6415-201ENSMUST00000118488 348 ntBASIC11.18□□□□□ -0.62
Trav18A0A075B656 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav18A0A075B656 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.18□□□□□ -0.62
Trav18A0A075B656 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.18□□□□□ -0.62
Trav18A0A075B656 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav18A0A075B656 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms