Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm10156-201ENSMUST00000122364 462 ntBASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Gm24644-201ENSMUST00000157114 139 ntBASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Gm29127-201ENSMUST00000188304 517 ntBASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Gm45784-201ENSMUST00000188360 142 ntBASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.15□□□□□ -0.14
Smarcb1Q9Z0H3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Smarcb1Q9Z0H3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Smarcb1Q9Z0H3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Gm13226-201ENSMUST00000117838 404 ntBASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcb1Q9Z0H3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Smarcb1Q9Z0H3 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Gm29608-201ENSMUST00000190444 463 ntBASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Gm16372-201ENSMUST00000073088 450 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms