Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trem1Q9JKE2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Gm12644-201ENSMUST00000119935 606 ntBASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Gm12895-201ENSMUST00000122214 226 ntBASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Gm11780-201ENSMUST00000136880 516 ntBASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.22□□□□□ -0.45
Trem1Q9JKE2 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trem1Q9JKE2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trem1Q9JKE2 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.21□□□□□ -0.46
Trem1Q9JKE2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trem1Q9JKE2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trem1Q9JKE2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trem1Q9JKE2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms