Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
U2af1Q9D883 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
U2af1Q9D883 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.93■□□□□ 0.46
U2af1Q9D883 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
U2af1Q9D883 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC17.93■□□□□ 0.46
U2af1Q9D883 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.93■□□□□ 0.46
U2af1Q9D883 Gm42550-201ENSMUST00000201553 960 ntBASIC17.93■□□□□ 0.46
U2af1Q9D883 Gm6983-201ENSMUST00000214912 628 ntBASIC17.93■□□□□ 0.46
U2af1Q9D883 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.93■□□□□ 0.46
U2af1Q9D883 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
U2af1Q9D883 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
U2af1Q9D883 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
U2af1Q9D883 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
U2af1Q9D883 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
U2af1Q9D883 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
U2af1Q9D883 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
U2af1Q9D883 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.93■□□□□ 0.46
U2af1Q9D883 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
U2af1Q9D883 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
U2af1Q9D883 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
U2af1Q9D883 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
U2af1Q9D883 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
U2af1Q9D883 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
U2af1Q9D883 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
U2af1Q9D883 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
U2af1Q9D883 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
U2af1Q9D883 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm12928-201ENSMUST00000117115 573 ntBASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm12537-201ENSMUST00000119266 1002 ntBASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm12070-201ENSMUST00000119551 1002 ntBASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm12671-201ENSMUST00000119978 1002 ntBASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm13292-201ENSMUST00000120014 1000 ntBASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm12403-201ENSMUST00000121384 959 ntBASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.92■□□□□ 0.46
U2af1Q9D883 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm9002-201ENSMUST00000178437 499 ntBASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm10359-201ENSMUST00000180167 1002 ntBASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm12033-201ENSMUST00000180654 1002 ntBASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm5559-201ENSMUST00000180755 1002 ntBASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm29608-201ENSMUST00000190444 463 ntBASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm8463-201ENSMUST00000208573 613 ntBASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm17870-201ENSMUST00000219489 1174 ntBASIC17.92■□□□□ 0.46
U2af1Q9D883 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC17.92■□□□□ 0.46
U2af1Q9D883 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.92■□□□□ 0.46
U2af1Q9D883 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
U2af1Q9D883 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
U2af1Q9D883 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
U2af1Q9D883 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
U2af1Q9D883 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC17.92■□□□□ 0.46
U2af1Q9D883 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
U2af1Q9D883 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
U2af1Q9D883 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
U2af1Q9D883 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
U2af1Q9D883 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
U2af1Q9D883 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.91■□□□□ 0.46
U2af1Q9D883 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
U2af1Q9D883 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
U2af1Q9D883 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
U2af1Q9D883 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
U2af1Q9D883 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
U2af1Q9D883 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
U2af1Q9D883 Gm15371-201ENSMUST00000117057 784 ntBASIC17.91■□□□□ 0.46
U2af1Q9D883 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.91■□□□□ 0.46
U2af1Q9D883 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC17.91■□□□□ 0.46
U2af1Q9D883 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
U2af1Q9D883 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.91■□□□□ 0.46
U2af1Q9D883 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
U2af1Q9D883 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
U2af1Q9D883 Gm5035-201ENSMUST00000215581 927 ntBASIC17.91■□□□□ 0.46
U2af1Q9D883 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC17.91■□□□□ 0.46
U2af1Q9D883 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
U2af1Q9D883 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
U2af1Q9D883 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
U2af1Q9D883 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
U2af1Q9D883 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.91■□□□□ 0.46
U2af1Q9D883 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
U2af1Q9D883 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
U2af1Q9D883 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
U2af1Q9D883 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
U2af1Q9D883 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
U2af1Q9D883 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms