Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Q9CYI0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q9CYI0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.11■□□□□ 0.01
Q9CYI0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Q9CYI0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC15.11■□□□□ 0.01
Q9CYI0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.11■□□□□ 0.01
Q9CYI0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.11■□□□□ 0.01
Q9CYI0 Gm26464-201ENSMUST00000157094 305 ntBASIC15.11■□□□□ 0.01
Q9CYI0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Q9CYI0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.11■□□□□ 0.01
Q9CYI0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.11■□□□□ 0.01
Q9CYI0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Gm37105-201ENSMUST00000192251 2085 ntBASIC15.11■□□□□ 0.01
Q9CYI0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.11■□□□□ 0.01
Q9CYI0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.11■□□□□ 0.01
Q9CYI0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q9CYI0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CYI0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CYI0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CYI0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CYI0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CYI0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CYI0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CYI0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CYI0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CYI0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.1■□□□□ 0.01
Q9CYI0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CYI0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Q9CYI0 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Q9CYI0 Mir7085-201ENSMUST00000184353 66 ntBASIC15.1■□□□□ 0.01
Q9CYI0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
Q9CYI0 Gm2495-201ENSMUST00000191160 466 ntBASIC15.1■□□□□ 0.01
Q9CYI0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CYI0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CYI0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CYI0 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.1■□□□□ 0.01
Q9CYI0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CYI0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CYI0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CYI0 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.1■□□□□ 0.01
Q9CYI0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Q9CYI0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Q9CYI0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Q9CYI0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Q9CYI0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Q9CYI0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Q9CYI0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.09■□□□□ 0.01
Q9CYI0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.09■□□□□ 0.01
Q9CYI0 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.09■□□□□ 0.01
Q9CYI0 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.09■□□□□ 0.01
Q9CYI0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Q9CYI0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms