Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Gm13015-201ENSMUST00000118674 204 ntBASIC13.57□□□□□ -0.24
Ssu72Q9CY97 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ssu72Q9CY97 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Gm5566-201ENSMUST00000116118 459 ntBASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ssu72Q9CY97 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.55□□□□□ -0.24
Ssu72Q9CY97 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms