Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RpainQ9CWY9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RpainQ9CWY9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Gm12151-201ENSMUST00000121374 290 ntBASIC14.31□□□□□ -0.12
RpainQ9CWY9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Gm17837-201ENSMUST00000186435 985 ntBASIC14.31□□□□□ -0.12
RpainQ9CWY9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.31□□□□□ -0.12
RpainQ9CWY9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.31□□□□□ -0.12
RpainQ9CWY9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RpainQ9CWY9 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.3□□□□□ -0.12
RpainQ9CWY9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.3□□□□□ -0.12
RpainQ9CWY9 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.3□□□□□ -0.12
RpainQ9CWY9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RpainQ9CWY9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Gm28630-201ENSMUST00000187806 498 ntBASIC14.29□□□□□ -0.12
RpainQ9CWY9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RpainQ9CWY9 Gm6888-201ENSMUST00000221983 706 ntBASIC14.29□□□□□ -0.12
RpainQ9CWY9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms