Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chchd1Q9CQA6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chchd1Q9CQA6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chchd1Q9CQA6 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chchd1Q9CQA6 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chchd1Q9CQA6 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chchd1Q9CQA6 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.26□□□□□ -0.77
Chchd1Q9CQA6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chchd1Q9CQA6 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chchd1Q9CQA6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 AC153794.1-201ENSMUST00000169148 126 ntBASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Gm44454-201ENSMUST00000198541 138 ntBASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chchd1Q9CQA6 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Rprl3-201ENSMUST00000157400 290 ntBASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Mir5122-201ENSMUST00000175004 89 ntBASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Gm8655-201ENSMUST00000221159 852 ntBASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chchd1Q9CQA6 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms