Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.18□□□□□ -0.3
Rab28Q99KL7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab28Q99KL7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Gm15371-201ENSMUST00000117057 784 ntBASIC13.17□□□□□ -0.3
Rab28Q99KL7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.17□□□□□ -0.3
Rab28Q99KL7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Gm27701-201ENSMUST00000184498 110 ntBASIC13.17□□□□□ -0.3
Rab28Q99KL7 Gm38223-201ENSMUST00000194484 695 ntBASIC13.17□□□□□ -0.3
Rab28Q99KL7 Gm9794-201ENSMUST00000202370 423 ntBASIC13.17□□□□□ -0.3
Rab28Q99KL7 Gm9908-201ENSMUST00000211534 448 ntBASIC13.17□□□□□ -0.3
Rab28Q99KL7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab28Q99KL7 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab28Q99KL7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rab28Q99KL7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.16□□□□□ -0.3
Rab28Q99KL7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.16□□□□□ -0.3
Rab28Q99KL7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.16□□□□□ -0.3
Rab28Q99KL7 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.16□□□□□ -0.3
Rab28Q99KL7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.16□□□□□ -0.3
Rab28Q99KL7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.16□□□□□ -0.3
Rab28Q99KL7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rab28Q99KL7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms