Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd2Q99JR8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd2Q99JR8 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd2Q99JR8 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd2Q99JR8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd2Q99JR8 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd2Q99JR8 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd2Q99JR8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcd2Q99JR8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Gm27516-201ENSMUST00000184237 98 ntBASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Gm45930-201ENSMUST00000221330 292 ntBASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Gm10146-201ENSMUST00000072739 309 ntBASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smarcd2Q99JR8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Mir686-201ENSMUST00000102174 109 ntBASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Gm25927-201ENSMUST00000175058 117 ntBASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Gm43133-201ENSMUST00000197472 463 ntBASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd2Q99JR8 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd2Q99JR8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd2Q99JR8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.73□□□□□ -0.21
Smarcd2Q99JR8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd2Q99JR8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smarcd2Q99JR8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
Smarcd2Q99JR8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd2Q99JR8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd2Q99JR8 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd2Q99JR8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Smarcd2Q99JR8 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.73□□□□□ -0.21
Smarcd2Q99JR8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd2Q99JR8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd2Q99JR8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms