Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Gm15920-201ENSMUST00000118998 402 ntBASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Gm38216-201ENSMUST00000194872 1214 ntBASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 AC154828.2-201ENSMUST00000220908 1070 ntBASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Gm18719-201ENSMUST00000196696 1413 ntBASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Gm14701-201ENSMUST00000117156 348 ntBASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb3Q91XZ7 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Gm8749-201ENSMUST00000117737 331 ntBASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Gm43452-201ENSMUST00000201873 991 ntBASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb3Q91XZ7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb3Q91XZ7 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms