Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TraipQ8VIG6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.53□□□□□ -0.08
TraipQ8VIG6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TraipQ8VIG6 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.53□□□□□ -0.08
TraipQ8VIG6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.53□□□□□ -0.08
TraipQ8VIG6 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.53□□□□□ -0.08
TraipQ8VIG6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Gm12384-201ENSMUST00000119228 919 ntBASIC14.53□□□□□ -0.08
TraipQ8VIG6 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.53□□□□□ -0.08
TraipQ8VIG6 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.53□□□□□ -0.08
TraipQ8VIG6 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TraipQ8VIG6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TraipQ8VIG6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TraipQ8VIG6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TraipQ8VIG6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TraipQ8VIG6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TraipQ8VIG6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TraipQ8VIG6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TraipQ8VIG6 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TraipQ8VIG6 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC14.52□□□□□ -0.08
TraipQ8VIG6 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.52□□□□□ -0.09
TraipQ8VIG6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TraipQ8VIG6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TraipQ8VIG6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.52□□□□□ -0.09
TraipQ8VIG6 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TraipQ8VIG6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TraipQ8VIG6 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.52□□□□□ -0.09
TraipQ8VIG6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.52□□□□□ -0.09
TraipQ8VIG6 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.52□□□□□ -0.09
TraipQ8VIG6 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.52□□□□□ -0.09
TraipQ8VIG6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.52□□□□□ -0.09
TraipQ8VIG6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TraipQ8VIG6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TraipQ8VIG6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TraipQ8VIG6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TraipQ8VIG6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TraipQ8VIG6 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TraipQ8VIG6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TraipQ8VIG6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TraipQ8VIG6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
TraipQ8VIG6 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.51□□□□□ -0.09
TraipQ8VIG6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.51□□□□□ -0.09
TraipQ8VIG6 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.51□□□□□ -0.09
TraipQ8VIG6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Gm22331-201ENSMUST00000158066 136 ntBASIC14.51□□□□□ -0.09
TraipQ8VIG6 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Gm27731-201ENSMUST00000185192 107 ntBASIC14.51□□□□□ -0.09
TraipQ8VIG6 Gm29608-201ENSMUST00000190444 463 ntBASIC14.51□□□□□ -0.09
TraipQ8VIG6 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Gm43630-201ENSMUST00000201550 776 ntBASIC14.51□□□□□ -0.09
TraipQ8VIG6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TraipQ8VIG6 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms