Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh18Q8VHR0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Pcdh18Q8VHR0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh18Q8VHR0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh18Q8VHR0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh18Q8VHR0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh18Q8VHR0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh18Q8VHR0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh18Q8VHR0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh18Q8VHR0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh18Q8VHR0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh18Q8VHR0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh18Q8VHR0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Gm6973-201ENSMUST00000117080 721 ntBASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh18Q8VHR0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Gm15467-201ENSMUST00000120582 445 ntBASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Gm11025-201ENSMUST00000140773 466 ntBASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Pcdh18Q8VHR0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms