Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Mir6392-201ENSMUST00000184924 108 ntBASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.15
Rprd1aQ8VDS4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Rprd1aQ8VDS4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rprd1aQ8VDS4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 Gm14928-201ENSMUST00000120198 477 ntBASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rprd1aQ8VDS4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Gm12091-201ENSMUST00000146791 830 ntBASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Gm23984-201ENSMUST00000157139 203 ntBASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Gm8515-201ENSMUST00000194852 576 ntBASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Gm43094-201ENSMUST00000196549 921 ntBASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Gm18018-201ENSMUST00000198273 408 ntBASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Gm45668-201ENSMUST00000211271 493 ntBASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rprd1aQ8VDS4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Gm12341-201ENSMUST00000119724 503 ntBASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms