Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Gm15806-201ENSMUST00000120696 955 ntBASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Mir497b-201ENSMUST00000093601 125 ntBASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
Ndc1Q8VCB1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ndc1Q8VCB1 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ndc1Q8VCB1 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.89□□□□□ -0.35
Ndc1Q8VCB1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms