Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Clrn1Q8K445 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.9□□□□□ -0.34
Clrn1Q8K445 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.9□□□□□ -0.34
Clrn1Q8K445 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.9□□□□□ -0.34
Clrn1Q8K445 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn1Q8K445 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Clrn1Q8K445 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Clrn1Q8K445 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Clrn1Q8K445 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Gm18905-201ENSMUST00000205454 928 ntBASIC12.89□□□□□ -0.35
Clrn1Q8K445 Gm44719-201ENSMUST00000206404 149 ntBASIC12.89□□□□□ -0.35
Clrn1Q8K445 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.89□□□□□ -0.35
Clrn1Q8K445 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.89□□□□□ -0.35
Clrn1Q8K445 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn1Q8K445 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Syt7-204ENSMUST00000223586 1344 ntBASIC12.88□□□□□ -0.35
Clrn1Q8K445 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms