Protein–RNA interactions for Protein: Q8K389

Cdk5rap2, CDK5 regulatory subunit-associated protein 2, mousemouse

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap2Q8K389 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdk5rap2Q8K389 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Gm12291-201ENSMUST00000121627 311 ntBASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Gm8738-201ENSMUST00000172606 329 ntBASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Gm30285-201ENSMUST00000214614 422 ntBASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Gm8228-201ENSMUST00000189949 2192 ntBASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Gm9061-201ENSMUST00000182707 1006 ntBASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Gm9004-201ENSMUST00000218739 1222 ntBASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Morn2-202ENSMUST00000227729 656 ntBASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdk5rap2Q8K389 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 Gm10608-202ENSMUST00000213924 676 ntBASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 Gm3287-205ENSMUST00000228893 1332 ntBASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdk5rap2Q8K389 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdk5rap2Q8K389 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdk5rap2Q8K389 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC18.17■□□□□ 0.5
Cdk5rap2Q8K389 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdk5rap2Q8K389 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdk5rap2Q8K389 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC18.17■□□□□ 0.5
Cdk5rap2Q8K389 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Cdk5rap2Q8K389 Gm7619-201ENSMUST00000210649 1282 ntBASIC18.17■□□□□ 0.5
Cdk5rap2Q8K389 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cdk5rap2Q8K389 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Cdk5rap2Q8K389 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdk5rap2Q8K389 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
Cdk5rap2Q8K389 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdk5rap2Q8K389 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cdk5rap2Q8K389 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdk5rap2Q8K389 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdk5rap2Q8K389 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Gm17208-201ENSMUST00000168388 535 ntBASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdk5rap2Q8K389 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cdk5rap2Q8K389 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cdk5rap2Q8K389 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms